ncRNA ID | novel_gma_miR5239 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:40063655-40063780 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835758;SRR835762;SRR835763;SRR835766;SRR835768;SRR835771 |
Length | 21 |
Mature sequence(if miRNA) | 106 - UUAUGGAAGAAGCUCAAUUCA - 126 |
Stem-loop(if miRNA) |
--                                C        -        UG A    CUC   AAUUGAGUUUCUUUCAUGAGCUAAAAUCAACU AUGUACUU AAUUUUUG  G AGUU   U   |||||||||||||||||||||||||||||||| |||||||| ||||||||  | ||||   C   UUAACUCGAAGAAGGUAUUCGAUUUUAGUUGA UACGUGAA UUGAAAAC  C UCAA   G AC                                A        C        CU G    UUU |
Stem-loop sequence | AAUUGAGUUUCUUUCAUGAGCUAAAAUCAACUCAUGUACUUAAUUUUUGUGGAAGUUCUCUCGUUUAACUGCUCCAAAAGUUCAAGUGCAUAAGUUGAUUUUAGCUUAUGGAAGAAGCUCAAUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006574366.2 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100798622 (LOC100798622), transcript variant X1, mRNA | uncharacterized LOC100798622(LOC100798622) | coding protein | psRNATarget |