| ncRNA ID | novel_gma_miR5223 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr12:13432967-13433107 [-] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR3160569 |
| Length | 20 |
| Mature sequence(if miRNA) | 1 - CUUCCGGAAGGCUCACCGUC - 20 |
| Stem-loop(if miRNA) |
---CGA ------- AAAAUCGUUUCAUU CCCU A GAGCUUUCCGGAAGACCUGUUA UUCCG ACUUCCGGAAGAA UCUUCCGGA A |||||||||||||||||||||| ||||| ||||||||||||| ||||||||| U CUCGGAAGGCCUUCUGGGCAAU AAGGC UGAAGGUCUUCUU AGAAGGCCU C CUGCCA CCCCAAG ------------CU --CU U |
| Stem-loop sequence | CGAGAGCUUUCCGGAAGACCUGUUAUUCCGAAAAUCGUUUCAUUACUUCCGGAAGAACCCUUCUUCCGGAAAUCUUCCGGAAGAUCUUCUUCUGGAAGUUCCGGAAGAACCCCUAACGGGUCUUCCGGAAGGCUCACCGUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_014779302.1 |
|
2.5 | PREDICTED: Glycine max IMPACT family member in pol 5'region-like (LOC100797344), transcript variant X1, mRNA | IMPACT family member in pol 5'region-like(LOC100797344) | coding protein | psRNATarget | |||||||||
| XM_006585866.2 |
|
2.5 | PREDICTED: Glycine max IMPACT family member in pol 5'region-like (LOC100797344), transcript variant X2, mRNA | IMPACT family member in pol 5'region-like(LOC100797344) | coding protein | psRNATarget |