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BaseInfo

ncRNA ID novel_gma_miR5222
Species Glycine max
Class miRNA
Genome position Chr9:47297919-47298087 [+]
Reference genome Glycine_max_v2.0
Source SRR3160569
Length 24
Mature sequence(if miRNA) 1 - AUGACAUUACCACGGUACUCUAUU - 24
Stem-loop(if miRNA) --         -   C   A      UAUAUG      -  -AUUGC    --  UGACAUGAUUAAUUGAUCUAGCCAACGACUAUU
  AUGACAUUA CCA GGU CUCUAU      UAUUCU CC      UUAA  UU                                 A
  ||||||||| ||| ||| ||||||      |||||| ||      ||||  ||                                 U
  UAUUGUGGU GGU CUA GAGGUG      AUAAGA GG      CGGU  UC                                 A
CG         A   A   A      ---CUA      A  CUAUCA    UA  AUUGUGUUAAACAAUGGAUAAGUUGGUACAUUA
Stem-loop sequence AUGACAUUACCACGGUACUCUAUUAUAUGUAUUCUCCAUUGCUUAAUUUGACAUGAUUAAUUGAUCUAGCCAACGACUAUUAUAAUUACAUGGUUGAAUAGGUAACAAAUUGUGUUACUAUUGGCACUAUCGGAAGAAUAAUCGUGGAGAAUCAUGGAUGGUGUUAUGC