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BaseInfo

ncRNA ID novel_gma_miR5213
Species Glycine max
Class miRNA
Genome position Chr18:6220153-6220215 [-]
Reference genome Glycine_max_v2.0
Source SRR3160569
Length 21
Mature sequence(if miRNA) 1 - AAGUUGAUCCGCAAGUUACUU - 21
Stem-loop(if miRNA) --A      A        G           C
   UGACUU CGGAUCAA UUGAUCCGUAA A
   |||||| |||||||| ||||||||||| A
   AUUGAA GCCUAGUU AACUAGGCGUU G
UUC      C        G           C
Stem-loop sequence AUGACUUACGGAUCAAGUUGAUCCGUAACAAGCUUGCGGAUCAAGUUGAUCCGCAAGUUACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014777213.1
ncRNA:21   UUCAUUGAACGCCUAGUUGAA   1
  |*|*||||||||||||||*||
targets:3202   ACGAAACUUGCGGAUCAAGUU   3222

2.5 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g20770 (LOC100792265), mRNA pentatricopeptide repeat-containing protein At4g20770(LOC100792265) coding protein psRNATarget