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BaseInfo

ncRNA ID novel_gma_miR5212
Species Glycine max
Class miRNA
Genome position Chr10:4819075-4819140 [-]
Reference genome Glycine_max_v2.0
Source SRR3160569
Length 24
Mature sequence(if miRNA) 43 - GGAUUGAUGAUCCGUAUGAGUCAU - 66
Stem-loop(if miRNA) -GGAUUGA            G  A    AAUU
        UGAUCCGUAUGA UC UACG    G
        |||||||||||| || ||||    U
        ACUAGGCAUACU AG AUGC    U
UGUCAAAA            A  A    CUAA
Stem-loop sequence GGAUUGAUGAUCCGUAUGAGUCAUACGAAUUGUUAAUCCGUAAGAAUCAUACGGAUCAAAAACUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006579110.1
ncRNA:24   UACUGAGUAUGCCUAGUAGUUAGG   1
  *||==||||||||||||*||||||
targets:235   CUGGUUCAUACGGAUCAACAAUCC   258

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102670006), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102670006) coding protein psRNATarget
XM_014772823.1
ncRNA:24   UACUGAGUAUGCCUAGUAGUUAGG   1
  |**|||||||||||||=||||||=
targets:1101   AAAACUCAUACGGAUCGUCAAUCU   1124

2.5 PREDICTED: Glycine max probable S-adenosylmethionine carrier 2, chloroplastic (LOC100803828), mRNA probable S-adenosylmethionine carrier 2, chloroplastic(LOC100803828) coding protein psRNATarget