ncRNA ID | novel_gma_miR5212 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:4819075-4819140 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR3160569 |
Length | 24 |
Mature sequence(if miRNA) | 43 - GGAUUGAUGAUCCGUAUGAGUCAU - 66 |
Stem-loop(if miRNA) |
-GGAUUGA            G  A    AAUU         UGAUCCGUAUGA UC UACG    G         |||||||||||| || ||||    U         ACUAGGCAUACU AG AUGC    U UGUCAAAA            A  A    CUAA |
Stem-loop sequence | GGAUUGAUGAUCCGUAUGAGUCAUACGAAUUGUUAAUCCGUAAGAAUCAUACGGAUCAAAAACUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006579110.1 |
|
1.5 | PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102670006), mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC102670006) | coding protein | psRNATarget | |||||||||
XM_014772823.1 |
|
2.5 | PREDICTED: Glycine max probable S-adenosylmethionine carrier 2, chloroplastic (LOC100803828), mRNA | probable S-adenosylmethionine carrier 2, chloroplastic(LOC100803828) | coding protein | psRNATarget |