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BaseInfo

ncRNA ID	novel_gma_miR5204
Species	Glycine max
Class	miRNA
Genome position	Chr7:16236951-16237171 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295516;SRR1295519
Length	24
Mature sequence(if miRNA)	198 - AGGAUUUGAUAUAAUUGAGGGACU - 221
Stem-loop(if miRNA)	--                          AUA               -       C      UG       AA          GA   AUAAA   AU UUAGAACUAACUCUU   UCCCUUAAUUAUGUUAAAUCUUAUAA   UGAUUCUCAAGCUCA AUUUAAA GUUGAU  UUACAAA  AAACAUUGAU  UCA     AAA  G               U   ||||||||||||||||||||||||||   ||||||||||||||| ||||||| ||||||  |||||||  ||||||||||  |||     |||  |   AGGGAGUUAAUAUAGUUUAGGAUAUU   ACUAAGGGUUUGAGU UAAAUUU CAACUG  AGUGUUU  UUUGUAAUUA  AGU     GUG  U               G UC                          -AC               G       A      GU       -C          GC   GCACA   -- UAAUUUUCCACGCAG
Stem-loop sequence	UCCCUUAAUUAUGUUAAAUCUUAUAAAUAUGAUUCUCAAGCUCAAUUUAAACGUUGAUUGUUACAAAAAAAACAUUGAUGAUCAAUAAAAAAAUGUUAGAACUAACUCUUUGGACGCACCUUUUAAUUGUGACACGUGACGAUUAAUGUUUCUUUGUGAUGGUCAACAUUUAAAUGUGAGUUUGGGAAUCACAUUAUAGGAUUUGAUAUAAUUGAGGGACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014769705.1	ncRNA:24   UCAGGGAGUUAAUAUAGUUUAGGA   1   =***|=||||*||||||||||||| targets:4617   GAGACUUCAAAUAUAUCAAAUCCU   4640 Target Full Sequence	2.0	PREDICTED: Glycine max sister chromatid cohesion protein PDS5 homolog A-like (LOC100797921), transcript variant X3, mRNA	sister chromatid cohesion protein PDS5 homolog A-like(LOC100797921)	coding protein	psRNATarget
XM_006601327.2	ncRNA:24   UCAGGGAGUUAAUAUAGUUUAGGA   1   =***|=||||*||||||||||||| targets:4632   GAGACUUCAAAUAUAUCAAAUCCU   4655 Target Full Sequence	2.0	PREDICTED: Glycine max sister chromatid cohesion protein PDS5 homolog A-like (LOC100797921), transcript variant X2, mRNA	sister chromatid cohesion protein PDS5 homolog A-like(LOC100797921)	coding protein	psRNATarget
XM_014769704.1	ncRNA:24   UCAGGGAGUUAAUAUAGUUUAGGA   1   =***|=||||*||||||||||||| targets:4641   GAGACUUCAAAUAUAUCAAAUCCU   4664 Target Full Sequence	2.0	PREDICTED: Glycine max sister chromatid cohesion protein PDS5 homolog A-like (LOC100797921), transcript variant X1, mRNA	sister chromatid cohesion protein PDS5 homolog A-like(LOC100797921)	coding protein	psRNATarget