| ncRNA ID | novel_gma_miR5199 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr18:27803983-27804205 [-] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR3160568 |
| Length | 23 |
| Mature sequence(if miRNA) | 1 - CCUUAUUCAAAGACAGUUUCGGC - 23 |
| Stem-loop(if miRNA) |
-- A U CC A --- GUU C CC A GC A U A A CGAAAUUGUCUU GAAUA G UUAUUU AAGACGGUUU AGAC AUAACUGU UUAGAAGAUC ACAUUCA AG GGUUUUU CG UGUAAUCGUCUU GAAUG C |||||||||||| ||||| | |||||| |||||||||| |||| |||||||| |||||||||| ||||||| || ||||||| || |||||||||||| ||||| C GCUUUGACAGAA CUUAU C AAUAAG UUCUGUCAAA UCUG UAUUGGCA AAUCUUUUAG UGUAAGU UC CCAAAAA GU ACAUUAGCAGAA CUUAU C CG A U CC A GUU --- A CU G UA C U A A |
| Stem-loop sequence | CGAAAUUGUCUUAGAAUAUGCCUUAUUUAAAGACGGUUUAGACGUUAUAACUGUCUUAGAAGAUCCCACAUUCAAAGGCGGUUUUUACGUUGUAAUCGUCUUAGAAUGACCCAUAUUCAAAGACGAUUACAUUGCAAAAACCAUCUGUGAAUGUUCGAUUUUCUAAAACGGUUAUGUCUUUGAAACUGUCUUAGAAUAACCCUUAUUCAAAGACAGUUUCGGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_014765695.1 |
|
3.0 | PREDICTED: Glycine max uridine 5'-monophosphate synthase-like (LOC100780481), transcript variant X2, mRNA | uridine 5'-monophosphate synthase-like(LOC100780481) | coding protein | psRNATarget |