| ncRNA ID | novel_gma_miR5173 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr2:40335608-40335764 [-] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR3160566 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - ACAACAAAAUCGUGAUUCUGU - 21 |
| Stem-loop(if miRNA) |
--GA C C CAC U ---AA A A CA C GAA AAUCGUGA UU UGUUG UAG GGGGGUGUGAAAGA UACAACAAAAUU UG UUU UUGUA AUU C |||||||| || ||||| ||| |||||||||||||| |||||||||||| || ||| ||||| ||| A UUAGUGCU AA ACAAC AUC CCCCCACACUUUUU AUGUUGUUUUAA AC AAA AACAU UAA A UGUC - A AUA U GCAAC C A AC A AAU |
| Stem-loop sequence | GAAAUCGUGACUUCUGUUGCACUAGUGGGGGUGUGAAAGAAAUACAACAAAAUUAUGAUUUCAUUGUACAUUGAACAAUAAAAUAUACAACAAAAACACAAUUUUGUUGUACAACGUUUUUCACACCCCCUCUAAUACAACAAAAUCGUGAUUCUGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_003522695.3 |
|
2.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 8-like (LOC100785444), mRNA | CBL-interacting serine/threonine-protein kinase 8-like(LOC100785444) | coding protein | psRNATarget | |||||||||
| XM_003551739.3 |
|
2.5 | PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g02330-like (LOC100780582), mRNA | pentatricopeptide repeat-containing protein At3g02330-like(LOC100780582) | coding protein | psRNATarget |