ncRNA ID | novel_gma_miR5171 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:45546893-45546999 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR3160566 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCUCUCCAUUUGCUAAUCAUUAGU - 24 |
Stem-loop(if miRNA) |
--C         U   A         -          UGUC       ----    U    CUCUCCAUU GCU AUCAUUAGU AAUUUGUAGA    CUCUCAU    CUUU G    ||||||||| ||| ||||||||| ||||||||||    |||||||    ||||    GAGAGGUAA CGA UGGUAAUCG UUAAACAUCU    GAGAGUA    GAAG G CUC         U   C         A          --UU       UAUU    A |
Stem-loop sequence | CCUCUCCAUUUGCUAAUCAUUAGUAAUUUGUAGAUGUCCUCUCAUCUUUUGGAGAAGUUAUAUGAGAGUUUCUACAAAUUAGCUAAUGGUCAGCUAAUGGAGAGCUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006592028.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102670203 (LOC102670203), mRNA | uncharacterized LOC102670203(LOC102670203) | coding protein | psRNATarget |