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BaseInfo

ncRNA ID novel_gma_miR5166
Species Glycine max
Class miRNA
Genome position Chr14:10456737-10456821 [-]
Reference genome Glycine_max_v2.0
Source SRR3067738;SRR835766;SRR835767;SRR835772;SRR1451612;SRR1451626
Length 23
Mature sequence(if miRNA) 1 - GCUCACCACUCUUUCUGUCGGUU - 23
Stem-loop(if miRNA) --         -   -A         A       CU       A
  UUGACAGAA GAG  GUGAGCACA AGAGGCA  UGAUAUA U
  ||||||||| |||  ||||||||| |||||||  |||||||
  GGCUGUCUU CUC  CACUCGUGU UUUUCGU  ACUAUAU U
UU         U   AC         G       -C       C
Stem-loop sequence UUGACAGAAGAGAGUGAGCACAAAGAGGCACUUGAUAUAAUUCUAUAUCACUGCUUUUGUGUGCUCACCACUCUUUCUGUCGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410467.1
ncRNA:23   UUGGCUGUCUUUCUCACCACUCG   1
  ||||||||||||||||*||||||
targets:6   AACCGACAGAAAGAGUAGUGAGC   28

1.5 Sequence 8592 from Patent EP2074227 NA coding protein psRNATarget
JB170928.1
ncRNA:23   UUGGCUGUCUUUCUCACCACUCG   1
  ||||||||||||||||*||||||
targets:6   AACCGACAGAAAGAGUAGUGAGC   28

1.5 Sequence 8592 from Patent EP2559767 NA coding protein psRNATarget
LQ242597.1
ncRNA:23   UUGGCUGUCUUUCUCACCACUCG   1
  ||||||||||||||||*||||||
targets:6   AACCGACAGAAAGAGUAGUGAGC   28

1.5 Sequence 8592 from Patent EP2985353 NA coding protein psRNATarget