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BaseInfo

ncRNA ID novel_gma_miR5163
Species Glycine max
Class miRNA
Genome position Chr10:38618029-38618096 [-]
Reference genome Glycine_max_v2.0
Source SRR3067738;SRR835767;SRR835768;SRR835771;SRR835772
Length 21
Mature sequence(if miRNA) 48 - UGGAGAAGGGGAGCACGUGCA - 68
Stem-loop(if miRNA) --        G  A          AA   GA  A
  UGGAGAAG GG GCACGUGCAA  UCA  UU A
  |||||||| || ||||||||||  |||  || C
  ACCUCUUC UC CGUGCACGUU  AGU  AG U
CA        G  C          -G   GA  A
Stem-loop sequence UGGAGAAGGGGAGCACGUGCAAAAUCAGAUUAACUAGAAGUGAGUUGCACGUGCCCUGCUUCUCCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535646.3
ncRNA:21   ACGUGCACGAGGGGAAGAGGU   1
  |*|||||*|||*|||||||||
targets:685   UCCACGUUCUCACCUUCUCCA   705

2.5 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g08820 (LOC100807506), mRNA putative pentatricopeptide repeat-containing protein At3g08820(LOC100807506) coding protein psRNATarget