ncRNA ID | novel_gma_miR5163 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:38618029-38618096 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR3067738;SRR835767;SRR835768;SRR835771;SRR835772 |
Length | 21 |
Mature sequence(if miRNA) | 48 - UGGAGAAGGGGAGCACGUGCA - 68 |
Stem-loop(if miRNA) |
--        G  A          AA   GA  A   UGGAGAAG GG GCACGUGCAA  UCA  UU A   |||||||| || ||||||||||  |||  || C   ACCUCUUC UC CGUGCACGUU  AGU  AG U CA        G  C          -G   GA  A |
Stem-loop sequence | UGGAGAAGGGGAGCACGUGCAAAAUCAGAUUAACUAGAAGUGAGUUGCACGUGCCCUGCUUCUCCAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003535646.3 |
|
2.5 | PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g08820 (LOC100807506), mRNA | putative pentatricopeptide repeat-containing protein At3g08820(LOC100807506) | coding protein | psRNATarget |