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BaseInfo

ncRNA ID novel_gma_miR5160
Species Glycine max
Class miRNA
Genome position Chr13:40059332-40059507 [+]
Reference genome Glycine_max_v2.0
Source SRR3067738
Length 24
Mature sequence(if miRNA) 153 - AAAAGGCUUAUGGAUCAAGUUGAU - 176
Stem-loop(if miRNA) --              AA     --A         C     --C  ---UAU      A U   A  --A   AA     C           A
  CAACUUGAUCCGUA  AGCCU   AUGGAUCAA UUGAU   CG      GUUGAU U UUA GC   UAC  AUCAA UUGAUUCAUAA A
  ||||||||||||||  |||||   ||||||||| |||||   ||      |||||| | ||| ||   |||  ||||| ||||||||||| G
  GUUGAACUAGGUAU  UCGGA   UACCUAGUU AAUUG   GC      CAACUA G AAU CG   AUG  UAGUU AACUAAGUAUU A
UA              --     AAA         C     UAU  CUUGUU      A C   C  AAA   CC     C           C
Stem-loop sequence CAACUUGAUCCGUAAAAGCCUAAUGGAUCAACUUGAUCCGUAUGUUGAUAUUUUAAGCAUACAAAUCAACUUGAUUCAUAAAAGACUUAUGAAUCAACUUGAUCCGUAAAAGCCUAACGAAUCAACUUGUUCCGUAUGUUAACUUGAUCCAUAAAAGGCUUAUGGAUCAAGUUGAU