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BaseInfo

ncRNA ID novel_gma_miR5150
Species Glycine max
Class miRNA
Genome position Chr6:49187430-49187478 [+]
Reference genome Glycine_max_v2.0
Source SRR3067738;SRR835759;SRR835761;SRR835763;SRR835765;SRR835766;SRR835770;SRR835771;SRR835772
Length 24
Mature sequence(if miRNA) 1 - AGAAGGUUCUUUCGGUAGAACAAA - 24
Stem-loop(if miRNA) --A                    A
   GAAGGUUCUUUCGGUAGAAC A
   |||||||||||||||||||| A
   CUUCCAAGAAGGCCAUCUUG U
UUC                    U
Stem-loop sequence AGAAGGUUCUUUCGGUAGAACAAAUUGUUCUACCGGAAGAACCUUCCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT089703.1
ncRNA:24   AAAC-AAGAUGGCUUUCUUGGAAGA   1
  ||||-||**||=|||||||||||||
targets:480   UUUGCUUAGACUGAAAGAACCUUCU   504

3.0 Soybean clone JCVI-FLGm-2L11 unknown mRNA NA coding protein psRNATarget
AK246037.1
ncRNA:24   AAAC-AAGAUGGCUUUCUUGGAAGA   1
  ||||-||**||=|||||||||||||
targets:414   UUUGCUUAGACUGAAAGAACCUUCU   438

3.0 Glycine max cDNA, clone: GMFL01-49-H03 NA coding protein psRNATarget
XM_006584679.2
ncRNA:24   AAAC-AAGAUGGCUUUCUUGGAAGA   1
  ||||-||**||=|||||||||||||
targets:490   UUUGCUUAGACUGAAAGAACCUUCU   514

3.0 PREDICTED: Glycine max V-type proton ATPase subunit E-like (LOC106794127), mRNA V-type proton ATPase subunit E-like(LOC106794127) coding protein psRNATarget