ncRNA ID | novel_gma_miR5138 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:6334560-6334607 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR3067737;SRR3067738;SRR835768;SRR835770;SRR835771;SRR835772;SRR835773;SRR1451618 |
Length | 19 |
Mature sequence(if miRNA) | 30 - AGGGAUGGAAGGGCAGAGA - 48 |
Stem-loop(if miRNA) |
--      UC   -     AUCUA   UCUGUC  UCC UCUCU     U   ||||||  ||| |||||     C   AGACGG  AGG AGGGA     U AG      GA   U     ACCUA |
Stem-loop sequence | UCUGUCUCUCCUCUCUAUCUAUCUAUCCAAGGGAUGGAAGGGCAGAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003532784.3 |
|
2.5 | PREDICTED: Glycine max probable trehalose-phosphate phosphatase J (LOC100788735), mRNA | probable trehalose-phosphate phosphatase J(LOC100788735) | coding protein | psRNATarget |