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BaseInfo

ncRNA ID novel_gma_miR5138
Species Glycine max
Class miRNA
Genome position Chr18:6334560-6334607 [+]
Reference genome Glycine_max_v2.0
Source SRR3067737;SRR3067738;SRR835768;SRR835770;SRR835771;SRR835772;SRR835773;SRR1451618
Length 19
Mature sequence(if miRNA) 30 - AGGGAUGGAAGGGCAGAGA - 48
Stem-loop(if miRNA) --      UC   -     AUCUA
  UCUGUC  UCC UCUCU     U
  ||||||  ||| |||||     C
  AGACGG  AGG AGGGA     U
AG      GA   U     ACCUA
Stem-loop sequence UCUGUCUCUCCUCUCUAUCUAUCUAUCCAAGGGAUGGAAGGGCAGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532784.3
ncRNA:19   AGAGACGGGAAGGUAGGGA   1
  |||||*|=|||||||||||
targets:20   UCUCUUCUCUUCCAUCCCU   38

2.5 PREDICTED: Glycine max probable trehalose-phosphate phosphatase J (LOC100788735), mRNA probable trehalose-phosphate phosphatase J(LOC100788735) coding protein psRNATarget