Search result

BaseInfo

ncRNA ID novel_gma_miR5136
Species Glycine max
Class miRNA
Genome position Chr16:11393927-11394009 [+]
Reference genome Glycine_max_v2.0
Source SRR3067737;SRR835766;SRR835768
Length 21
Mature sequence(if miRNA) 63 - AAUCAUUGCAUAUAAUUUUUU - 83
Stem-loop(if miRNA) --                        A  -        CG  
  AAAAUUAUAUGCAAUGAUUUUUUU GC AAGAAAAU  UAG
  |||||||||||||||||||||||| || ||||||||  ||C
  UUUUAAUAUACGUUACUAAAAAAA CG UUUUUUUA  AUA
UU                        -  A        AU  
Stem-loop sequence AAAAUUAUAUGCAAUGAUUUUUUUAGCAAGAAAAUCGUAGCAUAUAAUUUUUUUAGCAAAAAAAUCAUUGCAUAUAAUUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544410.3
ncRNA:21   UUUUUUAAUAUACGUUACUAA   1
  =||||=||||*||||||||||
targets:2272   GAAAAGUUAUCUGCAAUGAUU   2292

2.5 PREDICTED: Glycine max nuclear pore complex protein NUP133-like (LOC100780148), mRNA nuclear pore complex protein NUP133-like(LOC100780148) coding protein psRNATarget
XM_003519612.3
ncRNA:21   UUUUUUAAUAUACGUUACUAA   1
  =||||=||||*||||||||||
targets:2272   GAAAAGUUAUCUGCAAUGAUU   2292

2.5 PREDICTED: Glycine max nuclear pore complex protein NUP133-like (LOC100793167), mRNA nuclear pore complex protein NUP133-like(LOC100793167) coding protein psRNATarget