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BaseInfo

ncRNA ID novel_gma_miR5135
Species Glycine max
Class miRNA
Genome position Chr16:11393922-11394004 [-]
Reference genome Glycine_max_v2.0
Source SRR3067737
Length 21
Mature sequence(if miRNA) 1 - AAUCAUUGCAUAUAAUUUUUU - 21
Stem-loop(if miRNA) --                         C   A     UA  
  AAAAUUAUAUGCAAUGAUUUUUUUG UAA AAAAU  UAU
  ||||||||||||||||||||||||| ||| |||||  ||G
  UUUUAAUAUACGUUACUAAAAAAAU GUU UUUUA  AUC
UU                         C   C     GC  
Stem-loop sequence AAAAUUAUAUGCAAUGAUUUUUUUGCUAAAAAAAUUAUAUGCUACGAUUUUCUUGCUAAAAAAAUCAUUGCAUAUAAUUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544410.3
ncRNA:21   UUUUUUAAUAUACGUUACUAA   1
  =||||=||||*||||||||||
targets:2272   GAAAAGUUAUCUGCAAUGAUU   2292

2.5 PREDICTED: Glycine max nuclear pore complex protein NUP133-like (LOC100780148), mRNA nuclear pore complex protein NUP133-like(LOC100780148) coding protein psRNATarget
XM_003519612.3
ncRNA:21   UUUUUUAAUAUACGUUACUAA   1
  =||||=||||*||||||||||
targets:2272   GAAAAGUUAUCUGCAAUGAUU   2292

2.5 PREDICTED: Glycine max nuclear pore complex protein NUP133-like (LOC100793167), mRNA nuclear pore complex protein NUP133-like(LOC100793167) coding protein psRNATarget