ncRNA ID | novel_gma_miR5135 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:11393922-11394004 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR3067737 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAUCAUUGCAUAUAAUUUUUU - 21 |
Stem-loop(if miRNA) |
--                         C   A     UA     AAAAUUAUAUGCAAUGAUUUUUUUG UAA AAAAU  UAU   ||||||||||||||||||||||||| ||| |||||  ||G   UUUUAAUAUACGUUACUAAAAAAAU GUU UUUUA  AUC UU                         C   C     GC   |
Stem-loop sequence | AAAAUUAUAUGCAAUGAUUUUUUUGCUAAAAAAAUUAUAUGCUACGAUUUUCUUGCUAAAAAAAUCAUUGCAUAUAAUUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003544410.3 |
|
2.5 | PREDICTED: Glycine max nuclear pore complex protein NUP133-like (LOC100780148), mRNA | nuclear pore complex protein NUP133-like(LOC100780148) | coding protein | psRNATarget | |||||||||
XM_003519612.3 |
|
2.5 | PREDICTED: Glycine max nuclear pore complex protein NUP133-like (LOC100793167), mRNA | nuclear pore complex protein NUP133-like(LOC100793167) | coding protein | psRNATarget |