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BaseInfo

ncRNA ID novel_gma_miR5130
Species Glycine max
Class miRNA
Genome position Chr14:35054158-35054224 [-]
Reference genome Glycine_max_v2.0
Source SRR3067737;SRR3067738;SRR835766
Length 24
Mature sequence(if miRNA) 44 - AAACUACUUCCGGAAGAACGUCAU - 67
Stem-loop(if miRNA) --      -             -G  A   U  A
  AAACUA CUUCCGGAAGAAC  UC UCC GA U
  |||||| |||||||||||||  || ||| || G
  UUUGAU GAAGGCCUUCUUG  AG AGG CU U
UU      U             GA  A   C  U
Stem-loop sequence AAACUACUUCCGGAAGAACGUCAUCCUGAAUGUUUCCGGAAGAAGGUUCUUCCGGAAGUUAGUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573284.2
ncRNA:24   UACUGCAAGAAGGCCUUCA-UCAAA   1
  |**|*||||||||||||||-|||||
targets:1824   AGAAGGUUCUUCCGGAAGUUAGUUU   1848

3.0 PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA aquaporin PIP1-2-like(LOC100781984) coding protein psRNATarget