Search result

BaseInfo

ncRNA ID novel_gma_miR5103
Species Glycine max
Class miRNA
Genome position Chr2:29747288-29747373 [-]
Reference genome Glycine_max_v2.0
Source SRR2968978
Length 24
Mature sequence(if miRNA) 63 - AUACAAAACCGAUGUUAACUUAUA - 86
Stem-loop(if miRNA) --                   U     A              C
  AUACAAAACCGAUGUUAAC UAUAG UUAACAUCGGUUUU A
  ||||||||||||||||||| ||||| ||||||||||||||
  UAUGUUUUGGCUACAAUUG AUAUU AAUUGUAGCCAAAA U
AA                   C     C              G
Stem-loop sequence AUACAAAACCGAUGUUAACUUAUAGAUUAACAUCGGUUUUCAUGAAAACCGAUGUUAACUUAUACGUUAACAUCGGUUUUGUAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006588741.2
ncRNA:24   AUAUUCAAUUGUAGCCAAAACAUA   1
  **|*=|||||||||||||||||||
targets:2929   GUUUGGUUAACAUCGGUUUUGUAU   2952

0.0 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102670366), transcript variant X2, mRNA phosphoinositide phosphatase SAC1-like(LOC102670366) coding protein psRNATarget
XM_014763017.1
ncRNA:24   AUAUUCAAUUGUAGCCAAAACAUA   1
  **|*=|||||||||||||||||||
targets:3025   GUUUGGUUAACAUCGGUUUUGUAU   3048

0.0 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102660101), transcript variant X1, mRNA phosphoinositide phosphatase SAC1-like(LOC102660101) coding protein psRNATarget