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BaseInfo

ncRNA ID novel_gma_miR5102
Species Glycine max
Class miRNA
Genome position Chr20:45907328-45907399 [+]
Reference genome Glycine_max_v2.0
Source SRR2968978
Length 24
Mature sequence(if miRNA) 1 - CGGAUUGAACUAUACGGAUUAGCA - 24
Stem-loop(if miRNA) --C   U      -         AG           
   GGA UGAACU AUACGGAUU  CAAUCCGUAUGA
   ||| |||||| |||||||||  |||||||||||U
   UUU AUUUGA UAUGCCUAA  GUUAGGCAUACU
UUU   U      G         CU           
Stem-loop sequence CGGAUUGAACUAUACGGAUUAGCAAUCCGUAUGAUUCAUACGGAUUGUCAAUCCGUAUGAGUUUAUUUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014765341.1
ncRNA:24   ACG-AUUAGGCAUAUCAAGUUAGGC   1
  *||-||||||**||||||||||||*
targets:2457   AGCAUAAUCCAAAUAGUUCAAUCCA   2481

3.0 PREDICTED: Glycine max uncharacterized LOC106794181 (LOC106794181), transcript variant X2, mRNA uncharacterized LOC106794181(LOC106794181) coding protein psRNATarget
XM_014765340.1
ncRNA:24   ACG-AUUAGGCAUAUCAAGUUAGGC   1
  *||-||||||**||||||||||||*
targets:2457   AGCAUAAUCCAAAUAGUUCAAUCCA   2481

3.0 PREDICTED: Glycine max uncharacterized LOC106794181 (LOC106794181), transcript variant X1, mRNA uncharacterized LOC106794181(LOC106794181) coding protein psRNATarget