ncRNA ID | novel_gma_miR5101 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:44028314-44028380 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968978 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAAGAUUCUUCCGGUAGAACAAA - 24 |
Stem-loop(if miRNA) |
--            C          ---     UC   AGAAGAUUCUUC GGUAGAACAA   AUUCU  C   |||||||||||| ||||||||||   |||||   UCUUCUAAGAAG CCAUCUUGUU   UAAGA  G CU            U          AAA     UG |
Stem-loop sequence | AGAAGAUUCUUCCGGUAGAACAAAUUCUUCCGGUAGAAUAAAUUGUUCUACCUGAAGAAUCUUCUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006602627.2 |
|
3.0 | PREDICTED: Glycine max probable WRKY transcription factor 33 (LOC100792833), transcript variant X2, mRNA | probable WRKY transcription factor 33(LOC100792833) | coding protein | psRNATarget | |||||||||
XM_014771244.1 |
|
3.0 | PREDICTED: Glycine max probable WRKY transcription factor 33 (LOC100792833), transcript variant X1, mRNA | probable WRKY transcription factor 33(LOC100792833) | coding protein | psRNATarget |