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BaseInfo

ncRNA ID novel_gma_miR5094
Species Glycine max
Class miRNA
Genome position Chr11:15554554-15554648 [+]
Reference genome Glycine_max_v2.0
Source SRR2968978
Length 22
Mature sequence(if miRNA) 1 - UCAUGCUUUGUGGAUCUUUGAC - 22
Stem-loop(if miRNA) --     -       G      GACU   UU   UC    ---U  -UC  U
  UCAUG CUUUGUG AUCUUU    UUU  UCA  GGUU    CU   GG G
  ||||| ||||||| ||||||    |||  |||  ||||    ||   ||
  AGUAU GAGAUAC UGGGAG    GAG  AGU  CCAG    GA   CC C
CU     U       G      ----   GC   UU    UUGU  UUU  A
Stem-loop sequence UCAUGCUUUGUGGAUCUUUGACUUUUUUUCAUCGGUUUCUUCGGUGCACCUUUAGUGUUGACCUUUGACGGAGGAGGGUGCAUAGAGUUAUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766154.1
ncRNA:22   CAGUUUCUAGGUGUUUCGUACU   1
  |**|||||||||||||||=|||
targets:698   GCGAAAGAUCCACAAAGCGUGA   719

1.5 PREDICTED: Glycine max uncharacterized LOC106795562 (LOC106795562), mRNA uncharacterized LOC106795562(LOC106795562) coding protein psRNATarget