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BaseInfo

ncRNA ID novel_gma_miR5090
Species Glycine max
Class miRNA
Genome position Chr1:53613880-53613941 [+]
Reference genome Glycine_max_v2.0
Source SRR2968978
Length 21
Mature sequence(if miRNA) 42 - UAUCCGUCGGGUAUCGGGUAU - 62
Stem-loop(if miRNA) --                  U  A UU AUU
  ACCCGAUACCCGACGGGU UG G  U   G
  |||||||||||||||||| || |  |
  UGGGCUAUGGGCUGCCUA GC C  A   U
UA                  U  C CU CCC
Stem-loop sequence ACCCGAUACCCGACGGGUUUGAGUUUAUUGUCCCAUCCCCGUAUCCGUCGGGUAUCGGGUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006598258.1
ncRNA:21   UAUGGGCUAUGGGCUGCCUAU   1
  ||||||||||||||||||=||
targets:562   AUACCCGAUACCCGACGGGUA   582

1.5 PREDICTED: Glycine max polygalacturonase inhibitor 2-like (LOC102660019), mRNA polygalacturonase inhibitor 2-like(LOC102660019) coding protein psRNATarget