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BaseInfo

ncRNA ID novel_gma_miR5089
Species Glycine max
Class miRNA
Genome position Chr19:29333628-29333682 [+]
Reference genome Glycine_max_v2.0
Source SRR2968978
Length 24
Mature sequence(if miRNA) 1 - AGGCUGUCAAAUCUGAUCGUGGUG - 24
Stem-loop(if miRNA) --A  -      A     A        G
   GG CUGUCA AUCUG UCGUGGUG U
   || |||||| ||||| |||||||| G
   CU GGUAGU UAGAC GGUAUCAU A
GAA  A      A     -        G
Stem-loop sequence AGGCUGUCAAAUCUGAUCGUGGUGGUGAGUACUAUGGCAGAUAUGAUGGAUCAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003553380.3
ncRNA:24   GUGGUGCUAGUCUAAACUGUCGGA   1
  *==|*||=||||||||*|||||||
targets:1366   GGUCUCGGUCAGAUUUCACAGCCU   1389

2.5 PREDICTED: Glycine max squamosa promoter-binding-like protein 9 (LOC100807165), mRNA squamosa promoter-binding-like protein 9(LOC100807165) coding protein psRNATarget