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BaseInfo

ncRNA ID	novel_gma_miR5085
Species	Glycine max
Class	miRNA
Genome position	Chr1:46762737-46762863 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2968978
Length	24
Mature sequence(if miRNA)	104 - GAUCAACUUGAUCCGGAAGAUGCU - 127
Stem-loop(if miRNA)	--   G           U       A                     U         A     U   CAU UUCCGGAUCAA UUGAUCC GAAGAUGCUUACGGAUCAAGU GAUCCGUAA CUAUU G   ||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||   GUA AAGGCCUAGUU AACUAGG CUUUUACGAAUGCCUAGUUCA CUAGGCAUU GAUGA U UC   G           C       C                     -         C     U
Stem-loop sequence	CAUGUUCCGGAUCAAUUUGAUCCAGAAGAUGCUUACGGAUCAAGUUGAUCCGUAAACUAUUUGUUAGUAGCUUACGGAUCACUUGAUCCGUAAGCAUUUUCCGGAUCAACUUGAUCCGGAAGAUGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003547498.3	ncRNA:24   UCGU--AGAAG--GCCUAGUUCAACUAG   1   *|=|--|||||--||||||||||||||| targets:41   CGUAAUUCUUCUGCGGAUCAAGUUGAUC   68 Target Full Sequence	2.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:24   UCGU--AGAAG--GCCUAGUUCAACUAG   1   *|=|--|||||--||||||||||||||| targets:636   CGUAAUUCUUCUGCGGAUCAAGUUGAUC   663 Target Full Sequence	2.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_006600975.2	ncRNA:24   UCGUAGAAGGCCUAGUUCAACUAG   1   |||--|||*||||||||*|||||| targets:1247   AGC--CUUACGGAUCAACUUGAUC   1268 Target Full Sequence	2.5	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget