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BaseInfo

ncRNA ID novel_gma_miR5077
Species Glycine max
Class miRNA
Genome position Chr18:46968889-46968947 [-]
Reference genome Glycine_max_v2.0
Source SRR2968978;SRR835758;SRR835767;SRR835771
Length 24
Mature sequence(if miRNA) 1 - AAAUUGAGAAUUCUAAGAUGGUUU - 24
Stem-loop(if miRNA) --             G    U   A   A
  ACCAUUUUAGAAU UUUA UUU UAA A
  ||||||||||||| |||| ||| ||| A
  UGGUAGAAUCUUA GAGU AAA AUU A
UU             A    U   A   A
Stem-loop sequence ACCAUUUUAGAAUGUUUAUUUUAUAAAAAAAUUAAAAAUUGAGAAUUCUAAGAUGGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762012.1
ncRNA:24   UUUGGUAGAAUCUUAAGAGUUAAA   1
  =|||==||||||||||||||||*|
targets:1819   GAACUGUCUUAGAAUUCUCAAUAU   1842

2.5 PREDICTED: Glycine max FAM206 family protein CG9288-like (LOC100819401), transcript variant X1, mRNA FAM206 family protein CG9288-like(LOC100819401) coding protein psRNATarget
AK244412.1
ncRNA:24   UUUGGUAGAAUCUUAAGAGUUAAA   1
  *|||**||||||||||||||||*|
targets:1504   UAACAUUCUUAGAAUUCUCAAUGU   1527

2.5 Glycine max cDNA, clone: GMFL01-02-P02 NA coding protein psRNATarget
AK244411.1
ncRNA:24   UUUGGUAGAAUCUUAAGAGUUAAA   1
  *|||**||||||||||||||||*|
targets:1504   UAACAUUCUUAGAAUUCUCAAUGU   1527

2.5 Glycine max cDNA, clone: GMFL01-02-P01 NA coding protein psRNATarget
AK285750.1
ncRNA:24   UUUGGUAGAAUCUUAAGAGUUAAA   1
  *|||**||||||||||||||||*|
targets:1503   UAACAUUCUUAGAAUUCUCAAUGU   1526

2.5 Glycine max cDNA, clone: GMFL01-15-K15 NA coding protein psRNATarget