ncRNA ID | novel_gma_miR5063 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:36057168-36057240 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968978;SRR835763;SRR835765;SRR835771 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUGCUUAGAAGGAUUUGAUAUGGG - 24 |
Stem-loop(if miRNA) |
--CU     -       U       GG  ----    UU     GCUUA GAAGGAU UGAUAUG  AG    GAUG  C     ||||| ||||||| |||||||  ||    ||||     CGAGU UUUUUUA GUUGUAC  UU    UUAU  A AAAC     A       C       UU  GAUU    GG |
Stem-loop sequence | CUGCUUAGAAGGAUUUGAUAUGGGAGGAUGUUCAGGUAUUUUAGUUUUCAUGUUGCAUUUUUUAUGAGCCAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003516812.3 |
|
2.5 | PREDICTED: Glycine max probable transmembrane ascorbate ferrireductase 4 (LOC100781811), mRNA | probable transmembrane ascorbate ferrireductase 4(LOC100781811) | coding protein | psRNATarget | |||||||||
XM_014767967.1 |
|
2.5 | PREDICTED: Glycine max 1-aminocyclopropane-1-carboxylate oxidase homolog 1 (LOC100789941), transcript variant X2, mRNA | 1-aminocyclopropane-1-carboxylate oxidase homolog 1(LOC100789941) | coding protein | psRNATarget |