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BaseInfo

ncRNA ID novel_gma_miR5063
Species Glycine max
Class miRNA
Genome position Chr1:36057168-36057240 [+]
Reference genome Glycine_max_v2.0
Source SRR2968978;SRR835763;SRR835765;SRR835771
Length 24
Mature sequence(if miRNA) 1 - CUGCUUAGAAGGAUUUGAUAUGGG - 24
Stem-loop(if miRNA) --CU     -       U       GG  ----    UU
    GCUUA GAAGGAU UGAUAUG  AG    GAUG  C
    ||||| ||||||| |||||||  ||    ||||
    CGAGU UUUUUUA GUUGUAC  UU    UUAU  A
AAAC     A       C       UU  GAUU    GG
Stem-loop sequence CUGCUUAGAAGGAUUUGAUAUGGGAGGAUGUUCAGGUAUUUUAGUUUUCAUGUUGCAUUUUUUAUGAGCCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003516812.3
ncRNA:24   GGGU--AUAGUUUAGGAAGAUUCGUC   1
  ||||--|||||||||||||*|||||*
targets:686   CCCAACUAUCAAAUCCUUCAAAGCAA   711

2.5 PREDICTED: Glycine max probable transmembrane ascorbate ferrireductase 4 (LOC100781811), mRNA probable transmembrane ascorbate ferrireductase 4(LOC100781811) coding protein psRNATarget
XM_014767967.1
ncRNA:24   GGGU--AUAGUUUAGGAAGAUUCGUC   1
  =|||--|||||||||||*|||||||*
targets:1310   UCCAACUAUCAAAUCCUCCUAAGCAU   1335

2.5 PREDICTED: Glycine max 1-aminocyclopropane-1-carboxylate oxidase homolog 1 (LOC100789941), transcript variant X2, mRNA 1-aminocyclopropane-1-carboxylate oxidase homolog 1(LOC100789941) coding protein psRNATarget