ncRNA ID | novel_gma_miR5062 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:29288370-29288522 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968978 |
Length | 21 |
Mature sequence(if miRNA) | 133 - UAAAUUAUAAAAAUAGUAGGU - 153 |
Stem-loop(if miRNA) |
--A     G          A    A  UA  UU     -      UAGAUAUGUAUU   -  AUUUUAGGCCCACGUAAAA    UAUUA UUUUUGUAAU UUAG CA  AG  AAUAU UAUCUU            UGU AA                   U    ||||| |||||||||| |||| ||  ||  ||||| ||||||            ||| ||    AUGAU AAAAAUAUUA AAUC GU  UC  UUAUA AUAGAA            ACU UU                   U UGG     -          -    -  UG  --     U      ----UAAAUUAA   U  AGUGAAUGGUCUUAUAUAU |
Stem-loop sequence | AUAUUAGUUUUUGUAAUAUUAGACAUAAGUUAAUAUUAUCUUUAGAUAUGUAUUUGUAAAUUUUAGGCCCACGUAAAAUUUAUAUAUUCUGGUAAGUGAUUUUCAAAUUAAAUAAGAUAUAUAUUCUGUUGCUAAAUUAUAAAAAUAGUAGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006578352.2 |
|
3.0 | PREDICTED: Glycine max T-complex protein 1 subunit eta-like (LOC102661973), mRNA | T-complex protein 1 subunit eta-like(LOC102661973) | coding protein | psRNATarget |