Search result

BaseInfo

ncRNA ID	novel_gma_miR5057
Species	Glycine max
Class	miRNA
Genome position	Chr15:42179254-42179349 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2968978
Length	24
Mature sequence(if miRNA)	1 - AAUGGAAGAAGGUGAUAGAUGACU - 24
Stem-loop(if miRNA)	-AAU         U  --  G UG   AAU   AA   AAGAGGAUUUC     GGAAGAAGG GA  UA A  ACU   UAC  GGA           C     ||||||||| ||  || |  |||   |||  |||           C     CCUUCUUCU CU  GU U  UGG   GUG  UCC           C UCUU         C  CA  G GU   -GU   -A   AGAUAGGGAAU
Stem-loop sequence	AAUGGAAGAAGGUGAUAGAUGACUAAUUACAAGGAAAGAGGAUUUCCCCUAAGGGAUAGACCUAGUGUGGGUUGUGUGACUCCUCUUCUUCCUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003554141.3	ncRNA:24   UCAG-UAGAUAGUGGAAGAAGGUAA   1   |||*-||*||||||=|||||||||| targets:2378   AGUAGAUGUAUCACUUUCUUCCAUU   2402 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 (LOC100796011), mRNA	probable inactive leucine-rich repeat receptor-like protein kinase At1g66830(LOC100796011)	coding protein	psRNATarget