ncRNA ID | novel_gma_miR5048 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:22588112-22588288 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968978 |
Length | 22 |
Mature sequence(if miRNA) | 156 - CAGAUUGGGUUCUGGACGUUUU - 177 |
Stem-loop(if miRNA) |
--   U G              GG --AAAA   G UG -G       GU AUUU  AAAA       UUUAU  -             -  A   GAC U UAGGAUUCAAUUUG  C      UUU A  A  GGCAAGU  G    CG    UCUGCAC     GC AGAAUUUUGUUGU CA A   ||| | ||||||||||||||  |      ||| |  |  |||||||  |    ||    |||||||     || ||||||||||||| ||   UUG A GUCUUGGGUUAGAC  G      AAG U  U  UCGUUUA  U    GU    AGACGUG     CG UUUUAAAACGACG GU U UU   C G              AU AUGAGA   G GU GG       UG -GUU  -AAA       --UUU  G             U  A |
Stem-loop sequence | GACUUGUAGGAUUCAAUUUGGGCAAAAUUUGAUGAGGGCAAGUGUGAUUUCGAAAAUCUGCACUUUAUGCAGAAUUUUGUUGUCAAAUAUGUGCAGCAAAAUUUUGGCUUUGUGCAGAAAAUGUUGUGUAUUUGCUGGUUGUGGAAAGAGUAGUACAGAUUGGGUUCUGGACGUUUU |