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BaseInfo

ncRNA ID novel_gma_miR5044
Species Glycine max
Class miRNA
Genome position Chr14:16354385-16354507 [+]
Reference genome Glycine_max_v2.0
Source SRR2968978
Length 24
Mature sequence(if miRNA) 100 - AAUGGUCAACAUUCAAAGUCGGGU - 123
Stem-loop(if miRNA) --            A             AA  -      A            CAUA    AG
  CCGACUUUGAAU UUGACCAUUCAAA  CG GUUUUG GGUAAACACCAU    AAAU  U
  |||||||||||| |||||||||||||  || |||||| ||||||||||||    ||||
  GGCUGAAACUUA AACUGGUAAGUUU  GC CAAAAU CUAUUUGUGGUA    UUUA  A
UG            C             CA  U      A            CCAC    CA
Stem-loop sequence CCGACUUUGAAUAUUGACCAUUCAAAAACGGUUUUGAGGUAAACACCAUCAUAAAAUAGUAACAUUUCACCAUGGUGUUUAUCAUAAAACUCGACUUUGAAUGGUCAACAUUCAAAGUCGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003543852.3
ncRNA:24   UGGGCUGAAACUUACAACUGGUAA   1
  ||*|-|||||*|||||||=|||||
targets:1277   ACAC-ACUUUAAAUGUUGGCCAUU   1299

2.5 PREDICTED: Glycine max transcription factor MYB86-like (LOC100813660), mRNA transcription factor MYB86-like(LOC100813660) coding protein psRNATarget