ncRNA ID | novel_gma_miR5044 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:16354385-16354507 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968978 |
Length | 24 |
Mature sequence(if miRNA) | 100 - AAUGGUCAACAUUCAAAGUCGGGU - 123 |
Stem-loop(if miRNA) |
--            A             AA  -      A            CAUA    AG   CCGACUUUGAAU UUGACCAUUCAAA  CG GUUUUG GGUAAACACCAU    AAAU  U   |||||||||||| |||||||||||||  || |||||| ||||||||||||    ||||   GGCUGAAACUUA AACUGGUAAGUUU  GC CAAAAU CUAUUUGUGGUA    UUUA  A UG            C             CA  U      A            CCAC    CA |
Stem-loop sequence | CCGACUUUGAAUAUUGACCAUUCAAAAACGGUUUUGAGGUAAACACCAUCAUAAAAUAGUAACAUUUCACCAUGGUGUUUAUCAUAAAACUCGACUUUGAAUGGUCAACAUUCAAAGUCGGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003543852.3 |
|
2.5 | PREDICTED: Glycine max transcription factor MYB86-like (LOC100813660), mRNA | transcription factor MYB86-like(LOC100813660) | coding protein | psRNATarget |