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BaseInfo

ncRNA ID novel_gma_miR5042
Species Glycine max
Class miRNA
Genome position Chr14:12359096-12359155 [+]
Reference genome Glycine_max_v2.0
Source SRR2968978;SRR835765
Length 24
Mature sequence(if miRNA) 1 - AGGGUAACUUAAACAAAGACGGUC - 24
Stem-loop(if miRNA) --A   U                 UCCUUC
   GGG AACUUAAACAAAGACGG      A
   ||| |||||||||||||||||
   CCC UUGAAUUUGUUUCUGCC      G
AUA   U                 CAAACC
Stem-loop sequence AGGGUAACUUAAACAAAGACGGUCCUUCAGCCAAACCCGUCUUUGUUUAAGUUUCCCAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763159.1
ncRNA:24   CUGGCAGAAACAAAUUCAAUGGGA   1
  ||||||||||||||||||*|||||
targets:32   GACCGUCUUUGUUUAAGUAACCCU   55

1.5 PREDICTED: Glycine max uncharacterized LOC100805011 (LOC100805011), transcript variant X4, mRNA uncharacterized LOC100805011(LOC100805011) coding protein psRNATarget
XM_014763157.1
ncRNA:24   CUGGCAGAAACAAAUUCAAUGGGA   1
  ||||||||||||||||||*|||||
targets:32   GACCGUCUUUGUUUAAGUAACCCU   55

1.5 PREDICTED: Glycine max uncharacterized LOC100805011 (LOC100805011), transcript variant X2, mRNA uncharacterized LOC100805011(LOC100805011) coding protein psRNATarget
XM_014763156.1
ncRNA:24   CUGGCAGAAACAAAUUCAAUGGGA   1
  ||||||||||||||||||*|||||
targets:32   GACCGUCUUUGUUUAAGUAACCCU   55

1.5 PREDICTED: Glycine max uncharacterized LOC100805011 (LOC100805011), transcript variant X1, mRNA uncharacterized LOC100805011(LOC100805011) coding protein psRNATarget
XM_014763158.1
ncRNA:24   CUGGCAGAAACAAAUUCAAUGGGA   1
  ||||||||||||||||||*|||||
targets:32   GACCGUCUUUGUUUAAGUAACCCU   55

1.5 PREDICTED: Glycine max uncharacterized LOC100805011 (LOC100805011), transcript variant X3, mRNA uncharacterized LOC100805011(LOC100805011) coding protein psRNATarget