ncRNA ID | novel_gma_miR5039 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:18460849-18460910 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968978 |
Length | 20 |
Mature sequence(if miRNA) | 43 - UUUGAAUGUAGUGUCUGGUU - 62 |
Stem-loop(if miRNA) |
--     UG A   A        C      A   CCAGA  U ACA UCAAAGAU GUUAUU U   |||||  | ||| |||||||| ||||||   GGUCU  G UGU AGUUUCUA CAAUAA G UU     GU A   A        C      U |
Stem-loop sequence | CCAGAUGUAACAAUCAAAGAUCGUUAUUAUGUAAUAACCAUCUUUGAAUGUAGUGUCUGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006579815.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100794305 (LOC100794305), transcript variant X3, mRNA | uncharacterized LOC100794305(LOC100794305) | coding protein | psRNATarget | |||||||||
XM_003525725.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100794305 (LOC100794305), transcript variant X1, mRNA | uncharacterized LOC100794305(LOC100794305) | coding protein | psRNATarget |