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BaseInfo

ncRNA ID novel_gma_miR5034
Species Glycine max
Class miRNA
Genome position Chr13:7984617-7984812 [+]
Reference genome Glycine_max_v2.0
Source SRR2968978;SRR3067738;SRR835758;SRR835759;SRR835762;SRR835763;SRR835765
Length 24
Mature sequence(if miRNA) 173 - AAUGAGAAGAUGAGUCAAGAACAA - 196
Stem-loop(if miRNA) --C                  C       A A            C       - ----U       --UAU   -----   A   -AA    AAGAAG   A  
   UUCUUGACUCAUCUUCUC UUGAAGU G AUUUCCAAUCAU UUUCUUC C     UCUCCAU     GCU     GCC UUG   CUUC      CAA GGA
   |||||||||||||||||| ||||||| | |||||||||||| ||||||| |     |||||||     |||     ||| |||   ||||      ||| ||C
   AAGAACUGAGUAGAAGAG AACUUCA C UAGAGGUUAGUG AAAGGAG G     GGAGGUA     CGA     CGG AAC   GAAG      GUU CCU
AAC                  U       C G            U       A UACAU       CACCU   ACAUC   -   CUG    -AAGUA   A  
Stem-loop sequence CUUCUUGACUCAUCUUCUCCUUGAAGUAGAAUUUCCAAUCAUCUUUCUUCCUUCUCCAUUAUGCUGCCAUUGAACUUCAAGAAGCAAAGGACUCCAUUGAUGAAGAAGGUCCAAGGCCUACAAGCUCCACAUGGAGGUACAUGAGAGGAAAUGUGAUUGGAGAUGCCACUUCAAUGAGAAGAUGAGUCAAGAACAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK286453.1
ncRNA:24   AACAAGAACUGAGUAGAAGAGUAA   1
  ||*||||*|||||||||||||*||
targets:1445   UUCUUCUAGACUCAUCUUCUCCUU   1468

2.5 Glycine max cDNA, clone: GMFL01-28-L19 NA coding protein psRNATarget