ncRNA ID | novel_gma_miR5034 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:7984617-7984812 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968978;SRR3067738;SRR835758;SRR835759;SRR835762;SRR835763;SRR835765 |
Length | 24 |
Mature sequence(if miRNA) | 173 - AAUGAGAAGAUGAGUCAAGAACAA - 196 |
Stem-loop(if miRNA) |
--C                  C       A A            C       - ----U       --UAU   -----   A   -AA    AAGAAG   A      UUCUUGACUCAUCUUCUC UUGAAGU G AUUUCCAAUCAU UUUCUUC C     UCUCCAU     GCU     GCC UUG   CUUC      CAA GGA    |||||||||||||||||| ||||||| | |||||||||||| ||||||| |     |||||||     |||     ||| |||   ||||      ||| ||C    AAGAACUGAGUAGAAGAG AACUUCA C UAGAGGUUAGUG AAAGGAG G     GGAGGUA     CGA     CGG AAC   GAAG      GUU CCU AAC                  U       C G            U       A UACAU       CACCU   ACAUC   -   CUG    -AAGUA   A   |
Stem-loop sequence | CUUCUUGACUCAUCUUCUCCUUGAAGUAGAAUUUCCAAUCAUCUUUCUUCCUUCUCCAUUAUGCUGCCAUUGAACUUCAAGAAGCAAAGGACUCCAUUGAUGAAGAAGGUCCAAGGCCUACAAGCUCCACAUGGAGGUACAUGAGAGGAAAUGUGAUUGGAGAUGCCACUUCAAUGAGAAGAUGAGUCAAGAACAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK286453.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-28-L19 | NA | coding protein | psRNATarget |