Search result

BaseInfo

ncRNA ID	novel_gma_miR5029
Species	Glycine max
Class	miRNA
Genome position	Chr1:14972144-14972207 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2968978
Length	24
Mature sequence(if miRNA)	41 - GGAGCGGAUCGUUUGAUACAGGUU - 64
Stem-loop(if miRNA)	--                   C  --GUA   U   CCUGUAUCAAGUGAUCCGC CC     AGG U   ||||||||||||||||||| ||     |||   GGACAUAGUUUGCUAGGCG GG     UCC A UU                   A  AUGAG   A
Stem-loop sequence	CCUGUAUCAAGUGAUCCGCCCCGUAAGGUUAACCUGAGUAGGAGCGGAUCGUUUGAUACAGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014779283.1	ncRNA:24   UUGGACAUAGUUUGCUAGGCGAGG   1   ||||||||||||=||||||||||| targets:2245   AACCUGUAUCAAGCGAUCCGCUCC   2268 Target Full Sequence	1.5	PREDICTED: Glycine max phosphoenolpyruvate carboxykinase [ATP]-like (LOC100777147), mRNA	phosphoenolpyruvate carboxykinase [ATP]-like(LOC100777147)	coding protein	psRNATarget
XM_006603844.2	ncRNA:24   UUGGACAUAGUUUGCUAGGCGAGG   1   |=||||||||||=||||||||||| targets:60   AGCCUGUAUCAAGCGAUCCGCUCC   83 Target Full Sequence	1.5	PREDICTED: Glycine max UDP-glycosyltransferase 83A1-like (LOC100800437), transcript variant X2, mRNA	UDP-glycosyltransferase 83A1-like(LOC100800437)	coding protein	psRNATarget