ncRNA ID | novel_gma_miR5025 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:2209877-2209975 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968978 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUUUUUGAUAUUGUAGAGGACGA - 24 |
Stem-loop(if miRNA) |
--     A     A   U       AAA           UA    C  UUU   GUCCU UGCAA AUC AAAAAAA   UUCACAUUUAA  AGUU UC   G   ||||| ||||| ||| |||||||   |||||||||||  |||| ||   U   CAGGA AUGUU UAG UUUUUUU   AAGUGUGAAUU  UCAA AG   G AG     G     A   -       -GA           -C    -  UUU |
Stem-loop sequence | GUCCUAUGCAAAAUCUAAAAAAAAAAUUCACAUUUAAUAAGUUCUCUUUGUGUUUGAAACUCUUAAGUGUGAAAGUUUUUUUGAUAUUGUAGAGGACGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006598254.2 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100785349 (LOC100785349), partial mRNA | uncharacterized LOC100785349(LOC100785349) | coding protein | psRNATarget | |||||||||
XM_006606109.2 |
|
2.5 | PREDICTED: Glycine max ethylene-responsive transcription factor ERF110 (LOC100802242), transcript variant X4, mRNA | ethylene-responsive transcription factor ERF110(LOC100802242) | coding protein | psRNATarget | |||||||||
XM_006606106.2 |
|
2.5 | PREDICTED: Glycine max ethylene-responsive transcription factor ERF110 (LOC100802242), transcript variant X2, mRNA | ethylene-responsive transcription factor ERF110(LOC100802242) | coding protein | psRNATarget |