ncRNA ID | novel_gma_miR5020 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:28747280-28747415 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295516;SRR1294476 |
Length | 24 |
Mature sequence(if miRNA) | 113 - AAGGACGUCGGGAUACAAUGCUCU - 136 |
Stem-loop(if miRNA) |
--    A        --     UGCU      GG -  UG C  UGGGACAUAAGUUUUUAUAUUAAUUGCA   AAGG CGUCGGGA  UACAA    CUAAUA  A UG  A AG                            U   |||| ||||||||  |||||    ||||||  | ||  | ||   UUCC GCAGUUUU  AUGUU    GAUAAA  A AA  U AG                            G UA    G        AA     --UU      -- C  UU -  UCACUCUAUUUUAUUUUAUCUGAUUGUA |
Stem-loop sequence | AAGGACGUCGGGAUACAAUGCUCUAAUAGGAUGUGACAGUGGGACAUAAGUUUUUAUAUUAAUUGCAUGAUGUUAGUCUAUUUUAUUUUAUCUCACUGAUUUAACAAAAUAGUUUUGUAAAUUUUGACGGCCUUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006576330.2 |
|
2.0 | PREDICTED: Glycine max cytochrome P450 704C1-like (LOC100792128), mRNA | cytochrome P450 704C1-like(LOC100792128) | coding protein | psRNATarget |