ncRNA ID | novel_gma_miR5017 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:31126341-31126538 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968978 |
Length | 24 |
Mature sequence(if miRNA) | 175 - GAAGACGUCUUCCGUGAGAUUCCA - 198 |
Stem-loop(if miRNA) |
--                                                  A   UC                             A   A  A   A   GAAGACGUCUUCCGUGAGAUUCCACAGAAGAAGCAUUCUUCCGCAGUUGU AUG  AACUGCGGAAGACAGCUUCUUCCGUGGAG CUC UG AAG C   |||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||| || |||   CUUCUGCAGAAGGCACUCUAAGGUGUCUUCUUCGUAAGAAGGCGUCAACA UAU  UUGACGCCUUCUGUCGAAGAAGGCACCUC GAG GC UUC G AC                                                  G   UC                             A   C  C   U |
Stem-loop sequence | GAAGACGUCUUCCGUGAGAUUCCACAGAAGAAGCAUUCUUCCGCAGUUGUAAUGUCAACUGCGGAAGACAGCUUCUUCCGUGGAGACUCAUGAAAGACGUCUUCCGCGAGACUCCACGGAAGAAGCUGUCUUCCGCAGUUCUUAUGACAACUGCGGAAGAAUGCUUCUUCUGUGGAAUCUCACGGAAGACGUCUUCCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003527348.3 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100788685 (LOC100788685), mRNA | uncharacterized LOC100788685(LOC100788685) | coding protein | psRNATarget |