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BaseInfo

ncRNA ID novel_gma_miR5008
Species Glycine max
Class miRNA
Genome position Chr8:13419610-13419663 [-]
Reference genome Glycine_max_v2.0
Source SRR2968978
Length 23
Mature sequence(if miRNA) 1 - UCUAAGACGGUUUUCGUGAAAUU - 23
Stem-loop(if miRNA) --   UG -                 A
  UUU  C AAAAUCGUCUUGGAAUG C
  |||  | ||||||||||||||||| A
  AAA  G UUUUGGCAGAAUCUUAC A
UU   GU C                 U
Stem-loop sequence UUUUGCAAAAUCGUCUUGGAAUGACAAUCAUUCUAAGACGGUUUUCGUGAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767301.1
ncRNA:23   UUAAAGUGCUUUUGGCAGAAUCU   1
  ==|||=|||||||=|||||||||
targets:29   GGUUUUACGAAAAUCGUCUUAGA   51

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase BSL3-like (LOC100814210), transcript variant X5, mRNA serine/threonine-protein phosphatase BSL3-like(LOC100814210) coding protein psRNATarget