Search result

BaseInfo

ncRNA ID	novel_gma_miR5003
Species	Glycine max
Class	miRNA
Genome position	Chr7:9525859-9525945 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2968978;SRR835761
Length	22
Mature sequence(if miRNA)	1 - CAUACAUGGAUAGUUAGGAUUA - 22
Stem-loop(if miRNA)	--CA                      AAAA    UAAUGAUGACA     UACAUGGAUAGUUAGGAUUAAA    UAUU           A     ||||||||||||||||||||||    ||||     AUGUACCUAUCAAUCUUAAUUU    GUGU           A UAGA                      ---A    UUUAGUACACA
Stem-loop sequence	CAUACAUGGAUAGUUAGGAUUAAAAAAAUAUUUAAUGAUGACAAAACACAUGAUUUUGUGAUUUAAUUCUAACUAUCCAUGUAAGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003528919.3	ncRNA:22   AUUAGGAUUGAUAGGUACAUAC   1   ||||=|||||||||||||||*| targets:1554   UAAUUCUAACUAUCCAUGUAAG   1575 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized GPI-anchored protein At4g28100-like (LOC100814208), mRNA	uncharacterized GPI-anchored protein At4g28100-like(LOC100814208)	coding protein	psRNATarget
XM_003534099.3	ncRNA:22   AUUAGGAUUGAUAGGUACAUAC   1   ||*|=||||||||*|||||||| targets:1616   UACUUCUAACUAUGCAUGUAUG   1637 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized GPI-anchored protein At4g28100-like (LOC100813726), mRNA	uncharacterized GPI-anchored protein At4g28100-like(LOC100813726)	coding protein	psRNATarget