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BaseInfo

ncRNA ID	novel_gma_miR5000
Species	Glycine max
Class	miRNA
Genome position	Chr11:27274775-27274955 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2968978
Length	24
Mature sequence(if miRNA)	1 - UUGCACUAGAAGAAUCAGCACCAA - 24
Stem-loop(if miRNA)	--           GA             CG   C        C       G             G     C    GC         C      UUGCACUAGAA  AUCAGCACCAAUU  UGC UCUUCCUC UCUACUA CUCAAUAUCUUUC UUUCA CUUU  UUUUGUAAA UACA   |||||||||||  |||||||||||||  ||| |||||||| ||||||| ||||||||||||| ||||| ||||  ||||||||| |||C   AACGUGAUCUU  UAGUCGUGGUUAG  ACG AGAAGGAG AGAUGAU GAGUUAUAGAAAG AAAGU GAAA  AAAACAUUU AUGU CC           GC             AU   A        C       A             G     U    AC         A
Stem-loop sequence	UUGCACUAGAAGAAUCAGCACCAAUUCGUGCCUCUUCCUCCUCUACUAGCUCAAUAUCUUUCGUUUCACCUUUGCUUUUGUAAACUACACUGUAAUUUACAAAACAAAAGUUGAAAGGAAAGAUAUUGAGAUAGUAGACGAGGAAGAAGCAUAGAUUGGUGCUGAUCGUUCUAGUGCAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006586135.2	ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1   ||||||||||||*||||||||||| targets:833   UUGGUGCUGAUUGUUCUAGUGCAA   856 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_014779469.1	ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1   ||||||||||||*||||||||||| targets:833   UUGGUGCUGAUUGUUCUAGUGCAA   856 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_006591670.1	ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1   ||||||||*|||*||||||||||| targets:89   UUGGUGCUAAUUGUUCUAGUGCAA   112 Target Full Sequence	2.5	PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA	glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828)	coding protein	psRNATarget