Search result

BaseInfo

ncRNA ID	novel_gma_miR4992
Species	Glycine max
Class	miRNA
Genome position	Chr5:24082624-24082795 [-]
Reference genome	Glycine_max_v2.0
Source	SRR2968978;SRR835762;SRR835763;SRR835765;SRR835771;SRR835773;SRR1451604;SRR1451605
Length	24
Mature sequence(if miRNA)	149 - UUGCACUAGAAGAAUCAGCACCAA - 172
Stem-loop(if miRNA)	--           GA             C   ------    ---      C           CG     C    GC         C  C   UUGCACUAGAA  AUCAGCACCAAUC GUG      CCUC   UACCAG UCAAUAUCUUU  UUUCA CUUU  UUUUGUAAA UA A   |||||||||||  ||||||||||||| |||      ||||   |||||| |||||||||||  ||||| ||||  ||||||||| || C   AACGUGAUCUU  UAGUCGUGGUUAG CAC      GGAG   AUGGUC AGUUAUAGAAA  AAAGU GAAA  AAAACAUUU AU U CC           GC             A   AAAGAA    CAG      U           AG     U    AC         A  A
Stem-loop sequence	UUGCACUAGAAGAAUCAGCACCAAUCCGUGCCUCUACCAGCUCAAUAUCUUUCGUUUCACCUUUGCUUUUGUAAACUACACUAUAAUUUACAAAACAAAAGUUGAAAGAAAAGAUAUUGAUCUGGUAGACGAGGAAGAAACACAGAUUGGUGCUGAUCGUUCUAGUGCAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006586135.2	ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1   ||||||||||||*||||||||||| targets:833   UUGGUGCUGAUUGUUCUAGUGCAA   856 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_014779469.1	ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1   ||||||||||||*||||||||||| targets:833   UUGGUGCUGAUUGUUCUAGUGCAA   856 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_006591670.1	ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1   ||||||||*|||*||||||||||| targets:89   UUGGUGCUAAUUGUUCUAGUGCAA   112 Target Full Sequence	2.5	PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA	glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828)	coding protein	psRNATarget