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BaseInfo

ncRNA ID novel_gma_miR4990
Species Glycine max
Class miRNA
Genome position Chr17:36361523-36361746 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR2968978
Length 24
Mature sequence(if miRNA) 201 - UUGCAGGGACAAAAAUGAAAAAAG - 224
Stem-loop(if miRNA) -    A     GUC          UUUUUUU                        U             U                        C   GAA  -AUAAA   A
 UUUU UCAUU   GUUCCUGUAA       UUUGUUUUAGUCCUUGCAAAAUGU UGUUUUGUUUUUU GUUCUUAAAGUGUUUUAGAUAGUG UUU   CA      AAA U
 |||| |||||   ||||||||||       |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||   ||      |||
 AAAA AGUAA   CAGGGACGUU       AAGCAAAAUCAGGAACGUUUUACA ACAAAACAAAAAA CAAGAAUUUCACAAAAUCUAUUAC AAA   GU      UUU A
G    A     AAA          -UUUUUU                        C             -                        A   AAA  GACAAG   C
Stem-loop sequence UUUUAUCAUUGUCGUUCCUGUAAUUUUUUUUUUGUUUUAGUCCUUGCAAAAUGUUUGUUUUGUUUUUUUGUUCUUAAAGUGUUUUAGAUAGUGCUUUGAACAAUAAAAAAAUACUUUGAACAGUGAAAAAAACAUUAUCUAAAACACUUUAAGAACAAAAAACAAAACACACAUUUUGCAAGGACUAAAACGAAUUUUUUUUGCAGGGACAAAAAUGAAAAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003527391.2
ncRNA:24   GAAAAAAGUAAAAACAGGGACGUU   1
  =|||||||||||||||||||||||
targets:563   UUUUUUUCAUUUUUGUCCCUGCAA   586

0.0 PREDICTED: Glycine max uncharacterized LOC100810092 (LOC100810092), partial mRNA uncharacterized LOC100810092(LOC100810092) coding protein psRNATarget