ncRNA ID | novel_gma_miR4990 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:36361523-36361746 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968974;SRR2968978 |
Length | 24 |
Mature sequence(if miRNA) | 201 - UUGCAGGGACAAAAAUGAAAAAAG - 224 |
Stem-loop(if miRNA) |
-    A     GUC          UUUUUUU                        U             U                        C   GAA  -AUAAA   A  UUUU UCAUU   GUUCCUGUAA       UUUGUUUUAGUCCUUGCAAAAUGU UGUUUUGUUUUUU GUUCUUAAAGUGUUUUAGAUAGUG UUU   CA      AAA U  |||| |||||   ||||||||||       |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||   ||      |||  AAAA AGUAA   CAGGGACGUU       AAGCAAAAUCAGGAACGUUUUACA ACAAAACAAAAAA CAAGAAUUUCACAAAAUCUAUUAC AAA   GU      UUU A G    A     AAA          -UUUUUU                        C             -                        A   AAA  GACAAG   C |
Stem-loop sequence | UUUUAUCAUUGUCGUUCCUGUAAUUUUUUUUUUGUUUUAGUCCUUGCAAAAUGUUUGUUUUGUUUUUUUGUUCUUAAAGUGUUUUAGAUAGUGCUUUGAACAAUAAAAAAAUACUUUGAACAGUGAAAAAAACAUUAUCUAAAACACUUUAAGAACAAAAAACAAAACACACAUUUUGCAAGGACUAAAACGAAUUUUUUUUGCAGGGACAAAAAUGAAAAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003527391.2 |
|
0.0 | PREDICTED: Glycine max uncharacterized LOC100810092 (LOC100810092), partial mRNA | uncharacterized LOC100810092(LOC100810092) | coding protein | psRNATarget |