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BaseInfo

ncRNA ID novel_gma_miR4981
Species Glycine max
Class miRNA
Genome position Chr16:5120187-5120256 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR2968978;SRR1451604;SRR1451605;SRR1451609
Length 21
Mature sequence(if miRNA) 1 - UAAUGUGUUGGUAUAGUGAAG - 21
Stem-loop(if miRNA) --   U       U         UAC   ----  UG
  UAA GUGUUGG AUAGUGAAG   CAU    UC  G
  ||| ||||||| |||||||||   |||    ||
  AUU CACAACC UGUCAUUUC   GUA    AG  C
GU   C       U         UUA   AUUA  UU
Stem-loop sequence UAAUGUGUUGGUAUAGUGAAGUACCAUUCUGGCUUGAAUUAAUGAUUCUUUACUGUUCCAACACCUUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001249071.2
ncRNA:21   GAAGUGAUAUGGUUGUGUAAU   1
  ***||*||||||||||||||=
targets:466   AAACAAUAUACCAACACAUUG   486

3.0 Glycine max uncharacterized LOC100526920 (LOC100526920), mRNA uncharacterized LOC100526920(LOC100526920) coding protein psRNATarget
BT091723.1
ncRNA:21   GAAGUGAUAUGGUUGUGUAAU   1
  ***||*||||||||||||||=
targets:469   AAACAAUAUACCAACACAUUG   489

3.0 Soybean clone JCVI-FLGm-8N1 unknown mRNA NA coding protein psRNATarget