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BaseInfo

ncRNA ID	novel_gma_miR4979
Species	Glycine max
Class	miRNA
Genome position	Chr16:16983684-16983726 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2968974
Length	20
Mature sequence(if miRNA)	1 - UUUGUAGGAUUGAGUUAGGC - 20
Stem-loop(if miRNA)	--   G     -U       GG   UUU UAGGA  UGAGUUA  C   ||| |||||  |||||||   AAG AUCUU  ACUCAAU  C UG   A     UC       AC
Stem-loop sequence	UUUGUAGGAUUGAGUUAGGCCCAUAACUCACUUUCUAAGAAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006591104.2	ncRNA:20   CGGAUUGAGUUAGGAUGUUU   1   |=|||||||||||||||||| targets:3367   GUCUAACUCAAUCCUACAAA   3386 Target Full Sequence	1.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC100796191), mRNA	TMV resistance protein N-like(LOC100796191)	coding protein	psRNATarget
XM_006590969.2	ncRNA:20   CGGAUUGAGUUAGGAUGUUU   1   ||=||||||||||||||||| targets:2525   GCUUAACUCAAUCCUACAAA   2544 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100797428 (LOC100797428), transcript variant X3, mRNA	uncharacterized LOC100797428(LOC100797428)	coding protein	psRNATarget
XM_006590969.2	ncRNA:20   CGGAUUGAGUUAGGAUGUUU   1   |||||||||||*|||||||| targets:2815   GCCUAACUCAAACCUACAAA   2834 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100797428 (LOC100797428), transcript variant X3, mRNA	uncharacterized LOC100797428(LOC100797428)	coding protein	psRNATarget
BT094198.1	ncRNA:20   CGGAUUGAGUUAGGAUGUUU   1   ||||||||||||||*||||| targets:258   GCCUAACUCAAUCCCACAAA   277 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-18G8 unknown mRNA	NA	coding protein	psRNATarget
XM_003555145.3	ncRNA:20   CGGAUUGAGUUAGGAUGUUU   1   ||||||||||||||*||||| targets:2538   GCCUAACUCAAUCCCACAAA   2557 Target Full Sequence	1.5	PREDICTED: Glycine max aluminum-activated malate transporter 12-like (LOC100796724), transcript variant X3, mRNA	aluminum-activated malate transporter 12-like(LOC100796724)	coding protein	psRNATarget
XM_006590969.2	ncRNA:20   CGGAUUGAGUUAGGAUGUUU   1   |=|||||||||*|||||||| targets:2238   GUCUAACUCAACCCUACAAA   2257 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100797428 (LOC100797428), transcript variant X3, mRNA	uncharacterized LOC100797428(LOC100797428)	coding protein	psRNATarget
XM_014762132.1	ncRNA:20   CGGAUUGAGUUAGGAUGUUU   1   |=|||||||||*|||||||| targets:1504   GUCUAACUCAACCCUACAAA   1523 Target Full Sequence	2.5	PREDICTED: Glycine max SKP1-like protein 21 (LOC100775387), transcript variant X2, mRNA	SKP1-like protein 21(LOC100775387)	coding protein	psRNATarget
XM_014776737.1	ncRNA:20   CGGAUUGAGUUAGGAUGUUU   1   *|||||=|||||||||*||| targets:725   ACCUAAUUCAAUCCUAAAAA   744 Target Full Sequence	2.5	PREDICTED: Glycine max S-locus-specific glycoprotein BS29-2-like (LOC106798962), mRNA	S-locus-specific glycoprotein BS29-2-like(LOC106798962)	coding protein	psRNATarget
XM_014770446.1	ncRNA:20   CGGAUUGAGUUAGGAUGUUU   1   *|=||||||*|||||||||| targets:1133   ACUUAACUCCAUCCUACAAA   1152 Target Full Sequence	2.5	PREDICTED: Glycine max AT-hook motif nuclear-localized protein 16-like (LOC100788581), mRNA	AT-hook motif nuclear-localized protein 16-like(LOC100788581)	coding protein	psRNATarget
XM_006595692.2	ncRNA:20   CGGAUUGAGUUAGGAUGUUU   1   *|=||||||*|||||||||| targets:1213   ACUUAACUCCAUCCUACAAA   1232 Target Full Sequence	2.5	PREDICTED: Glycine max AT-hook motif nuclear-localized protein 16-like (LOC100804941), mRNA	AT-hook motif nuclear-localized protein 16-like(LOC100804941)	coding protein	psRNATarget