ncRNA ID | novel_gma_miR4974 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:17564372-17564469 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968974;SRR835767 |
Length | 24 |
Mature sequence(if miRNA) | 75 - UAAGAUCAAGUAGUUAACAUCGGU - 98 |
Stem-loop(if miRNA) |
--          CAA     G            U     AAA A     U   CGAUGUUAAC   UUGAU UUAACAUCGGUU UUUAA   A GAUGU A   ||||||||||   ||||| |||||||||||| |||||   | |||||   GCUACAAUUG   AACUA AAUUGUAGCCAA AAAUU   U UUAUA G UG          AUG     G            U     --G A     U |
Stem-loop sequence | CGAUGUUAACCAAUUGAUGUUAACAUCGGUUUUUUAAAAAAAGAUGUUAGUAUAUUAUGUUAAAUAACCGAUGUUAAGAUCAAGUAGUUAACAUCGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT094157.1 |
|
3.0 | Soybean clone JCVI-FLGm-24L19 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_014769928.1 |
|
3.0 | PREDICTED: Glycine max protein ESKIMO 1-like (LOC100785578), transcript variant X2, mRNA | protein ESKIMO 1-like(LOC100785578) | coding protein | psRNATarget | |||||||||
XM_014769926.1 |
|
3.0 | PREDICTED: Glycine max protein ESKIMO 1-like (LOC100785578), transcript variant X1, mRNA | protein ESKIMO 1-like(LOC100785578) | coding protein | psRNATarget |