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BaseInfo

ncRNA ID novel_gma_miR4974
Species Glycine max
Class miRNA
Genome position Chr10:17564372-17564469 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR835767
Length 24
Mature sequence(if miRNA) 75 - UAAGAUCAAGUAGUUAACAUCGGU - 98
Stem-loop(if miRNA) --          CAA     G            U     AAA A     U
  CGAUGUUAAC   UUGAU UUAACAUCGGUU UUUAA   A GAUGU A
  ||||||||||   ||||| |||||||||||| |||||   | |||||
  GCUACAAUUG   AACUA AAUUGUAGCCAA AAAUU   U UUAUA G
UG          AUG     G            U     --G A     U
Stem-loop sequence CGAUGUUAACCAAUUGAUGUUAACAUCGGUUUUUUAAAAAAAGAUGUUAGUAUAUUAUGUUAAAUAACCGAUGUUAAGAUCAAGUAGUUAACAUCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT094157.1
ncRNA:24   UGGCUACAAUUGAUGAACUAGAAU   1
  |**|||||*=|||||||||||||*
targets:1046   AAGGAUGUGGACUACUUGAUCUUU   1069

3.0 Soybean clone JCVI-FLGm-24L19 unknown mRNA NA coding protein psRNATarget
XM_014769928.1
ncRNA:24   UGGCUACAAUUGAUGAACUAGAAU   1
  |**|||||*=|||||||||||||*
targets:1108   AAGGAUGUGGACUACUUGAUCUUU   1131

3.0 PREDICTED: Glycine max protein ESKIMO 1-like (LOC100785578), transcript variant X2, mRNA protein ESKIMO 1-like(LOC100785578) coding protein psRNATarget
XM_014769926.1
ncRNA:24   UGGCUACAAUUGAUGAACUAGAAU   1
  |**|||||*=|||||||||||||*
targets:1362   AAGGAUGUGGACUACUUGAUCUUU   1385

3.0 PREDICTED: Glycine max protein ESKIMO 1-like (LOC100785578), transcript variant X1, mRNA protein ESKIMO 1-like(LOC100785578) coding protein psRNATarget