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BaseInfo

ncRNA ID novel_gma_miR4969
Species Glycine max
Class miRNA
Genome position Chr15:13063118-13063222 [-]
Reference genome Glycine_max_v2.0
Source SRR2968974
Length 24
Mature sequence(if miRNA) 82 - AGGUGGAUGGAAGAAGAUGAUGGA - 105
Stem-loop(if miRNA) --       U          G     -----U    AA G G GA     --    C
  AGGUGGA GGAAGAAGAU AUGGA      GGAU  A A A  GGGUU  UCCC U
  ||||||| |||||||||| |||||      ||||  | | |  |||||  ||||
  UUCAUCU UCUUUUUUUG UGCCU      CUUG  U U U  CUCAG  AGGG A
CC       -          -     CAGAAU    GG G G GA     AU    A
Stem-loop sequence AGGUGGAUGGAAGAAGAUGAUGGAUGGAUAAAGAGAGAGGGUUUCCCCUAAGGGAUAGACUCAGUGUGUGGGUUCUAAGACUCCGUGUUUUUUUCUUCUACUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524132.3
ncRNA:24   AGGUAGUAGAAGAAGGUAGGUGGA   1
  |=|*||*||||||||||*||||||
targets:267   UUCUUCUUCUUCUUCCACCCACCU   290

2.5 PREDICTED: Glycine max crocetin glucosyltransferase, chloroplastic-like (LOC100791653), mRNA crocetin glucosyltransferase, chloroplastic-like(LOC100791653) coding protein psRNATarget