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BaseInfo

ncRNA ID novel_gma_miR4968
Species Glycine max
Class miRNA
Genome position Chr18:23392573-23392755 [-]
Reference genome Glycine_max_v2.0
Source SRR1295516;SRR1451610
Length 22
Mature sequence(if miRNA) 162 - UGUAAUUUUCUGUCUGGUUCCC - 183
Stem-loop(if miRNA) --         --C    U     -CCCAUUCCAAACA       AAACAUGC       ----     CACAAAA     -- -      U  GAC     
  UGUAAUUUU   UGUC GGUUC              UAUUUUG        UUGGGUU    GCAUC       CGUCA  C CAUCAA UG   CAGACC
  |||||||||   |||| |||||              |||||||        |||||||    |||||       |||||  | |||||| ||   |||||U
  AUAUUAAAA   GCAG UCAAG              AUAAAAC        AACCUAG    CGUAG       GCAGU  G GUAGUU AU   GUUUGA
AC         AUA    -     UAACAUAAAAUAAA       --------       UUAC     --AAGCA     AC A      C  -AU     
Stem-loop sequence UGUAAUUUUCUGUCUGGUUCCCCAUUCCAAACAUAUUUUGAAACAUGCUUGGGUUGCAUCCACAAAACGUCACCAUCAAUUGGACCAGACCUAGUUUGUAUACUUGAUGAGCAUGACGACGAAGAUGCCAUUGAUCCAACAAAAUAAAAUAAAAUACAAUGAACUGACGAUAAAAAUUAUACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014770773.1
ncRNA:22   CCCUUGGUCUGUCUUUUAAUGU   1
  ||||||||||=|||||||||||
targets:128   GGGAACCAGAUAGAAAAUUACA   149

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106797069), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106797069) coding protein psRNATarget
XM_006578263.2
ncRNA:22   CCCUUGGUCUGUCUUUUAAUGU   1
  ||||||||||=|||||||||||
targets:900   GGGAACCAGAUAGAAAAUUACA   921

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102659618), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102659618) coding protein psRNATarget
XM_014776675.1
ncRNA:22   CCCUUGGUCUGUCUUUUAAUGU   1
  ||||||||||=|||||||||||
targets:684   GGGAACCAGAUAGAAAAUUACA   705

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC100790217), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC100790217) coding protein psRNATarget
XM_006600889.2
ncRNA:22   CCCUUGGUCUGUCUUUUAAUGU   1
  ||||||||||=|||||||||||
targets:128   GGGAACCAGAUAGAAAAUUACA   149

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102666222), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102666222) coding protein psRNATarget
XM_006579970.2
ncRNA:22   CCCUUGGUCUGUCUUUUAAUGU   1
  ||||||||||=|||||||||||
targets:308   GGGAACCAGAUAGAAAAUUACA   329

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC100782801), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC100782801) coding protein psRNATarget
XM_014766295.1
ncRNA:22   CCCUUGGUCUGUCUUUUAAUGU   1
  ||||||||||=|||||||||||
targets:842   GGGAACCAGAUAGAAAAUUACA   863

1.5 PREDICTED: Glycine max uncharacterized LOC106794312 (LOC106794312), mRNA uncharacterized LOC106794312(LOC106794312) coding protein psRNATarget
XM_014771675.1
ncRNA:22   CCCUUGGUCUGUCUUUUAAUGU   1
  ||||||||||=|||||||||||
targets:684   GGGAACCAGAUAGAAAAUUACA   705

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106794141), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106794141) coding protein psRNATarget
XM_006594783.2
ncRNA:22   CCCUUGGUCUGUCUUUUAAUGU   1
  ||||||||||=|||||||||||
targets:666   GGGAACCAGAUAGAAAAUUACA   687

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102670395), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102670395) coding protein psRNATarget
XM_014764660.1
ncRNA:22   CCCUUGGUCUGUCUUUUAAUGU   1
  |||||||||||||||||*||||
targets:317   GGGAACCAGACAGAAAACUACA   338

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102666932), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102666932) coding protein psRNATarget
XM_014778483.1
ncRNA:22   CC-CUUGGUCUGUCUUUUAAUGU   1
  ||-|||||||||||=||||||||
targets:109   GGAGAACCAGACAGGAAAUUACA   131

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106799588), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106799588) coding protein psRNATarget
XM_014774130.1
ncRNA:22   CCCUUGGUCUGUCUUUUAAUGU   1
  |||||*|||||||||||*||||
targets:235   GGGAAGCAGACAGAAAACUACA   256

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102660045), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102660045) coding protein psRNATarget
XM_014777438.1
ncRNA:22   CCCUUGGUCUGUCUUUUAAUGU   1
  |||||*|||||||||||*||||
targets:201   GGGAAGCAGACAGAAAACUACA   222

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106799245), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106799245) coding protein psRNATarget
XM_014775259.1
ncRNA:22   CC-CUUGGUCUGUCUUUUAAUGU   1
  ||-|||*|||||||||||*||||
targets:137   GGAGAAGCAGACAGAAAACUACA   159

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106798660), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106798660) coding protein psRNATarget
XM_014772472.1
ncRNA:22   CC-CUUGGUCUGUCUUUUAAUGU   1
  ||-|||*|||||||||||*||||
targets:109   GGAGAAGCAGACAGAAAACUACA   131

2.5 PREDICTED: Glycine max uncharacterized LOC106797646 (LOC106797646), mRNA uncharacterized LOC106797646(LOC106797646) coding protein psRNATarget
XM_014769495.1
ncRNA:22   CC-CUUGGUCUGUCUUUUAAUGU   1
  ||-|||*|||||||||||*||||
targets:137   GGAGAAGCAGACAGAAAACUACA   159

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106796621), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106796621) coding protein psRNATarget
XM_014764570.1
ncRNA:22   CC-CUUGGUCUGUCUUUUAAUGU   1
  ||-|||*|||||||||||*||||
targets:137   GGAGAAGCAGACAGAAAACUACA   159

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106795246), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106795246) coding protein psRNATarget
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