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BaseInfo

ncRNA ID novel_gma_miR4954
Species Glycine max
Class miRNA
Genome position Chr14:42407609-42407704 [-]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR2968978;SRR835762;SRR835763
Length 24
Mature sequence(if miRNA) 1 - AGAUUGUAGACAUUCUAAGACGGU - 24
Stem-loop(if miRNA) --U          -   -      UUUU  U           GA    C
   GUCUUAGAAU UCU CAAUUU    AU UUUUUUAAAAA  CAUU U
   |||||||||| ||| ||||||    || |||||||||||  ||||
   CAGAAUCUUA AGA GUUAGA    UA AAAAAGUUUUU  GUAG A
UGG          C   U      UUCU  C           GG    A
Stem-loop sequence UGUCUUAGAAUUCUCAAUUUUUUUAUUUUUUUUAAAAAGACAUUCUAAGAUGGGUUUUUGAAAAACAUUCUUAGAUUGUAGACAUUCUAAGACGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518405.3
ncRNA:24   UGGCAGAAUCUUACAGAUGUUAGA   1
  **=||||||||=||||||||||||
targets:1347   UGUGUCUUAGAGUGUCUACAAUCU   1370

1.5 PREDICTED: Glycine max protein FAM91A1-like (LOC100802520), mRNA protein FAM91A1-like(LOC100802520) coding protein psRNATarget
XM_006593829.2
ncRNA:24   UGGCAGAAUCUUACAGAUGUUAGA   1
  **=||*|||||||||||||||||*
targets:964   UGUGUAUUAGAAUGUCUACAAUCA   987

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X8, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_014766399.1
ncRNA:24   UGGCAGAAUCUUACAGAUGUUAGA   1
  **=||*|||||||||||||||||*
targets:1148   UGUGUAUUAGAAUGUCUACAAUCA   1171

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X7, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_006593826.2
ncRNA:24   UGGCAGAAUCUUACAGAUGUUAGA   1
  **=||*|||||||||||||||||*
targets:1577   UGUGUAUUAGAAUGUCUACAAUCA   1600

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X4, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_006593828.2
ncRNA:24   UGGCAGAAUCUUACAGAUGUUAGA   1
  **=||*|||||||||||||||||*
targets:1300   UGUGUAUUAGAAUGUCUACAAUCA   1323

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X6, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_006593827.2
ncRNA:24   UGGCAGAAUCUUACAGAUGUUAGA   1
  **=||*|||||||||||||||||*
targets:1311   UGUGUAUUAGAAUGUCUACAAUCA   1334

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X5, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_003556887.3
ncRNA:24   UGGCAGAAUCUUACAGAUGUUAGA   1
  **=||*|||||||||||||||||*
targets:1582   UGUGUAUUAGAAUGUCUACAAUCA   1605

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100813099), transcript variant X2, mRNA protein FAM91A1-like(LOC100813099) coding protein psRNATarget
XM_014766398.1
ncRNA:24   UGGCAGAAUCUUACAGAUGUUAGA   1
  **=||*|||||||||||||||||*
targets:1577   UGUGUAUUAGAAUGUCUACAAUCA   1600

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X1, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_003541223.3
ncRNA:24   UGGCAGAAUCUUACAGAUGUUAGA   1
  **=||*|||||||||||||||||*
targets:1592   UGUGUAUUAGAAUGUCUACAAUCA   1615

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X2, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget