Search result

BaseInfo

ncRNA ID novel_gma_miR4952
Species Glycine max
Class miRNA
Genome position Chr14:47829452-47829529 [-]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR2968978
Length 24
Mature sequence(if miRNA) 1 - AGUUUAUAUAUCUGUUGGACAAUU - 24
Stem-loop(if miRNA) --     G         -    --AA      CAUCGU   
  UUGUU AAUAGAUGU UAGG    GUCUCA      CUAC
  ||||| ||||||||| ||||    ||||||      |||C
  AACAG UUGUCUAUA AUUU    UAGGGU      GAUU
UU     G         U    GACG      --UCUU   
Stem-loop sequence UUGUUGAAUAGAUGUUAGGAAGUCUCACAUCGUCUACCUUAGUUCUUGGGAUGCAGUUUAUAUAUCUGUUGGACAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT094066.1
ncRNA:24   UUAACAGGUUGUCUAUAUAUUUGA   1
  |=|||||||||||||||||||=||
targets:172   AGUUGUCCAACAGAUAUAUAAGCU   195

1.5 Soybean clone JCVI-FLGm-24J13 unknown mRNA NA coding protein psRNATarget