ncRNA ID | novel_gma_miR4948 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:14972145-14972206 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968974;SRR835765;SRR835771 |
Length | 24 |
Mature sequence(if miRNA) | 39 - AGGAGCGGAUCGUUUGAUACAGGU - 62 |
Stem-loop(if miRNA) |
--                  C  --GUA   U   CUGUAUCAAGUGAUCCGC CC     AGG U   |||||||||||||||||| ||     |||   GACAUAGUUUGCUAGGCG GG     UCC A UG                  A  AUGAG   A |
Stem-loop sequence | CUGUAUCAAGUGAUCCGCCCCGUAAGGUUAACCUGAGUAGGAGCGGAUCGUUUGAUACAGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014779283.1 |
|
1.5 | PREDICTED: Glycine max phosphoenolpyruvate carboxykinase [ATP]-like (LOC100777147), mRNA | phosphoenolpyruvate carboxykinase [ATP]-like(LOC100777147) | coding protein | psRNATarget | |||||||||
XM_006603844.2 |
|
1.5 | PREDICTED: Glycine max UDP-glycosyltransferase 83A1-like (LOC100800437), transcript variant X2, mRNA | UDP-glycosyltransferase 83A1-like(LOC100800437) | coding protein | psRNATarget |