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BaseInfo

ncRNA ID novel_gma_miR4948
Species Glycine max
Class miRNA
Genome position Chr1:14972145-14972206 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR835765;SRR835771
Length 24
Mature sequence(if miRNA) 39 - AGGAGCGGAUCGUUUGAUACAGGU - 62
Stem-loop(if miRNA) --                  C  --GUA   U
  CUGUAUCAAGUGAUCCGC CC     AGG U
  |||||||||||||||||| ||     |||
  GACAUAGUUUGCUAGGCG GG     UCC A
UG                  A  AUGAG   A
Stem-loop sequence CUGUAUCAAGUGAUCCGCCCCGUAAGGUUAACCUGAGUAGGAGCGGAUCGUUUGAUACAGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014779283.1
ncRNA:24   UGGACAUAGUUUGCUAGGCGAGGA   1
  |||||||||||=||||||||||||
targets:2246   ACCUGUAUCAAGCGAUCCGCUCCU   2269

1.5 PREDICTED: Glycine max phosphoenolpyruvate carboxykinase [ATP]-like (LOC100777147), mRNA phosphoenolpyruvate carboxykinase [ATP]-like(LOC100777147) coding protein psRNATarget
XM_006603844.2
ncRNA:24   UGGACAUAGUUUGCUAGGCGAGGA   1
  =||||||||||=||||||||||||
targets:61   GCCUGUAUCAAGCGAUCCGCUCCU   84

1.5 PREDICTED: Glycine max UDP-glycosyltransferase 83A1-like (LOC100800437), transcript variant X2, mRNA UDP-glycosyltransferase 83A1-like(LOC100800437) coding protein psRNATarget